Template for a Ph.D. of M.Sc. thesis at Tel Aviv University, updated and with Hebrew part in LyX. It's available also on Github, see https://github.com/kourgeorge/tau-thesis-latex or https://github.com/alexlib/tau_thesis_lyx_template
\documentclass[12pt,english,twoside]{report}
\usepackage{mathptmx}
\renewcommand{\familydefault}{\rmdefault}
\usepackage[T1]{fontenc}
\usepackage[latin9]{inputenc}
\usepackage[a4paper]{geometry}
\setcounter{secnumdepth}{2} % Changed from 3 to 2. 0-chapter 1-section 2-subsection
\setcounter{tocdepth}{2} % Changed from 3 to 2. 0-chapter 1-section 2-subsection
\setlength{\parskip}{\medskipamount}
\setlength{\parindent}{0pt}
\usepackage{verbatim}
\usepackage{pdfpages}
\usepackage{graphicx}
\usepackage{subfig} %% This package has to be here
\usepackage{lipsum}
%Packages Added By George
\usepackage{setspace}
\usepackage{arabtex}
\usepackage[numbers]{natbib}
\usepackage{nomencl}
\usepackage{paralist}
\usepackage[linesnumbered]{algorithm2e}
\usepackage{color}
\usepackage{amsthm}
\usepackage[cmex10]{amsmath}
\usepackage{bbold}
\usepackage{multirow}
\usepackage{dsfont}
\usepackage{booktabs}
\usepackage{eufrak}
\usepackage{amssymb}
% Theorem Styles
\newtheorem{theorem}{Theorem}[section]
\newtheorem{lemma}[theorem]{Lemma}
\newtheorem{proposition}[theorem]{Proposition}
\newtheorem{corollary}[theorem]{Corollary}
% Definition Styles
\theoremstyle{definition}
\newtheorem{definition}{Definition}[section]
\newtheorem{example}{Example}[section]
\theoremstyle{remark}
\newtheorem{remark}{Remark}
\usepackage{etoolbox}
\newtoggle{edit-mode}
\togglefalse{edit-mode}
%\toggletrue{edit-mode}
% the following is useful when we have the old nomencl.sty package
\providecommand{\printnomenclature}{\printglossary}
\providecommand{\makenomenclature}{\makeglossary}
\makenomenclature
\doublespacing
\makeatletter
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% User specified LaTeX commands.
\usepackage{tauthesis}
\iftoggle{edit-mode}{
\geometry{verbose,tmargin=2cm,bmargin=2cm,lmargin=2cm,rmargin=6cm,headheight=1cm,headsep=1cm,footskip=1cm, marginparwidth=5cm}
}
\usepackage[font={small,bf}, labelfont={small,bf}, margin=1cm]{caption}
\usepackage{titlesec}
\newcommand{\hsp}{\hspace{20pt}}
\titleformat{\chapter}[hang]{\Huge\bfseries}{\thechapter\hsp}{0pt}{\Huge\bfseries}
\University{Tel Aviv University}
\Faculty{The Iby and Aladar Fleischman Faculty of Engineering}
\School{The Zandman-Slaner School of Graduate Studies}
\Department {School of Mechanical Engineering}
\Title{\textbf{ \uppercase {Thesis Title}}}
\Degree{Master of Science in Engineering}
\Author{Your name}
\Year{September 2017}
\Supervisor{Prof. First Supervisor}
\SecondSupervisor{Dr. Second Supervisor}
\makeatother
\usepackage{babel}
\begin{document}
\pagenumbering{gobble}
\titlepage
\secondtitlepage
\dedication{\textbf{\emph{To my whomever, \\
for being whatever}}}
\include{acknowledge}
\cleardoublepage
\pagenumbering{roman}
\setcounter{page}{1} % Start preliminary pages numbering (roman numerals).
\include{abstract}
\tableofcontents{}
\cleardoublepage
\addcontentsline{toc}{chapter}{Nomenclature}
\printnomenclature
\cleardoublepage
\listoffigures
\cleardoublepage
\listoftables
\textpages
\include{introduction}
\include{chapter}
\include{conclusions}
\bibliographystyle{plainnat}
\bibliography{references}
\appendix
\include{appendix}
\cleardoublepage
\newpage
\thispagestyle{empty}
\mbox{}
\includepdf[pages=-]{hebrew_part}
\end{document}